Journal: Experimental Biology and Medicine

Article Title: Featured Article: Modulation of fetal hemoglobin in hereditary persistence of fetal hemoglobin deletion type-2, compared to Sicilian δ β-thalassemia, by BCL11A and SOX6-targeting microRNAs

doi: 10.1177/1535370216668052

Figure Lengend Snippet: Mirnome (miRNA) expression profiles in CD34+-derived erythroid cells (after 13 days of culture) from two heterozygous for Sicilian δβ-thalassemia patients (βA/βδβ), two heterozygotic HPFH-2 subjects (βA/βHPFH) and three health controls (βA/βA). The dendrograms and heat map were acquired using the Agilent GeneSpring platform. Heat map legend: red = up-regulation, green = down-regulation, black = unmodulated (Pearson correlation metrics)

Article Snippet: The dendrograms and heat map were acquired using the Agilent GeneSpring platform.

Techniques: Expressing, Derivative Assay

Journal: MethodsX

Article Title: Multilayer network based comparative document analysis (MUNCoDA)

doi: 10.1016/j.mex.2020.100902

Figure Lengend Snippet: The dendrogram-based clustering of the analyzed countries.

Article Snippet: Fig 4 The Matlab code of the dendrogram used for document comparison is the following: The Matlab code of the multidimensional scaling based visualization of the similarities of the countries is the following:

Techniques:

Journal: MethodsX

Article Title: Multilayer network based comparative document analysis (MUNCoDA)

doi: 10.1016/j.mex.2020.100902

Figure Lengend Snippet:

Article Snippet: Fig 4 The Matlab code of the dendrogram used for document comparison is the following: The Matlab code of the multidimensional scaling based visualization of the similarities of the countries is the following:

Techniques:

Journal: Scientific Reports

Article Title: Phytochemical variation, phenolic compounds and antioxidant activity of wild populations of Iranian oak

doi: 10.1038/s41598-025-90991-4

Figure Lengend Snippet: Dendrogram from cluster analysis of morphological and phytochemical traits of Quercus brantii Lindl. populations based on Ward’s method.

Article Snippet: Fig. 9 Dendrogram from cluster analysis of morphological and phytochemical traits of Quercus brantii Lindl. populations based on Ward’s method.

Techniques:

Journal: Antibiotics

Article Title: Surveillance and Genomic Analysis of Third-Generation Cephalosporin-Resistant and Carbapenem-Resistant Klebsiella pneumoniae Complex in Germany

doi: 10.3390/antibiotics11101286

Figure Lengend Snippet: Dendrogram generated using Ridom SeqSphere+ for the HiR 3GCR/CR colonising K. pneumoniae complex isolates ( n = 27) coloured by study centre and identified by ST type, ignoring missing values. Each box represents one isolate from an individual patient according to sequence analysis of 2358 cgMLST target genes.

Article Snippet: Dendrogram generated using Ridom SeqSphere+ for the 3GCR/CR K. pneumoniae complex bloodstream isolates including HiR clones ( n = 80) coloured by study centre and identified by ST type, ignoring missing values.

Techniques: Generated, Sequencing

Journal: Antibiotics

Article Title: Surveillance and Genomic Analysis of Third-Generation Cephalosporin-Resistant and Carbapenem-Resistant Klebsiella pneumoniae Complex in Germany

doi: 10.3390/antibiotics11101286

Figure Lengend Snippet: Dendrogram generated using Ridom SeqSphere+ for the HiR 3GCR/CR K. pneumoniae complex bloodstream isolates ( n = 39) coloured by study centre and identified by ST type, ignoring missing values. Each box represents one isolate from an individual patient according to sequence analysis of 2358 cgMLST target genes.

Article Snippet: Dendrogram generated using Ridom SeqSphere+ for the 3GCR/CR K. pneumoniae complex bloodstream isolates including HiR clones ( n = 80) coloured by study centre and identified by ST type, ignoring missing values.

Techniques: Generated, Sequencing

Journal: Antibiotics

Article Title: Surveillance and Genomic Analysis of Third-Generation Cephalosporin-Resistant and Carbapenem-Resistant Klebsiella pneumoniae Complex in Germany

doi: 10.3390/antibiotics11101286

Figure Lengend Snippet: Dendrogram generated using Ridom SeqSphere+ for the HiR 3GCS/CS K. pneumoniae complex bloodstream isolates ( n = 15) coloured by study centre and identified by ST type, ignoring missing values. Each box represents one isolate from an individual patient according to sequence analysis of 2358 cgMLST target genes.

Article Snippet: Dendrogram generated using Ridom SeqSphere+ for the 3GCR/CR K. pneumoniae complex bloodstream isolates including HiR clones ( n = 80) coloured by study centre and identified by ST type, ignoring missing values.

Techniques: Generated, Sequencing

Journal: Translational Psychiatry

Article Title: Altered brain arginine metabolism in schizophrenia

doi: 10.1038/tp.2016.144

Figure Lengend Snippet: Dendrograms showing the similarities in the degree of expression of l -arginine (arginine) and its three main metabolites l -citrulline (citrulline), l -ornithine (ornithine) and agmatine in the frontal cortex (BA8) from non-psychiatric control ( a ) and schizophrenia ( b ) cases ( n =20 per group). The numbers indicate the distance levels (arbitrary unit) between arginine and each metabolite. ( c ) Arginine metabolic pathways. l -arginine can be metabolised by NOS, arginase and ADC to form a number of bioactive molecules (see the Introduction for detailed description). We found increased levels of arginase activity, arginase II protein expression and agmatine tissue concentration (indicated by the red letters and arrows), and reduced eNOS protein expression and GABA level (indicated by the green letters and arrows) in the schizophrenia cases. ADC, arginine decarboxylase; BA8, Brodmann's area 8; eNOS, endothelial NOS; GABA, γ-aminobutyric acid; iNOS, inducible NOS; NO, nitric oxide; NOS, nitric oxide synthase; nNOS, neuronal NOS.

Article Snippet: Dendrograms were generated using Minitab 16 to display the groups formed by clustering of variables and their similarity levels (defined as percentage of the minimum distance at each step relative to the maximum intervariable distance).,

Techniques: Expressing, Control, Activity Assay, Concentration Assay